Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Birc2-201ENSMUST00000054878 378 ntBASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps28Q9D1C8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps28Q9D1C8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps28Q9D1C8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps28Q9D1C8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps28Q9D1C8 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.35■□□□□ 0.21
Vps28Q9D1C8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps28Q9D1C8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms