Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 App-207ENSMUST00000227737 2827 ntBASIC18.85■□□□□ 0.61
Smc3Q9CW03 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Gm43799-201ENSMUST00000201845 579 ntBASIC18.85■□□□□ 0.61
Smc3Q9CW03 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc3Q9CW03 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.84■□□□□ 0.61
Smc3Q9CW03 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc3Q9CW03 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc3Q9CW03 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.83■□□□□ 0.6
Smc3Q9CW03 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc3Q9CW03 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc3Q9CW03 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Smc3Q9CW03 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms