Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
4930553M12RikQ9CUH1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Gm18669-201ENSMUST00000216049 778 ntBASIC15.02■□□□□ -0
4930553M12RikQ9CUH1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
4930553M12RikQ9CUH1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
4930553M12RikQ9CUH1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15□□□□□ -0.01
4930553M12RikQ9CUH1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms