Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm36967-201ENSMUST00000193814 266 ntBASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.89■□□□□ 0.13
Trim33Q99PP7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.89■□□□□ 0.13
Trim33Q99PP7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim33Q99PP7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Gm27704-201ENSMUST00000185094 107 ntBASIC15.88■□□□□ 0.13
Trim33Q99PP7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim33Q99PP7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.87■□□□□ 0.13
Trim33Q99PP7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Gm15794-201ENSMUST00000120182 631 ntBASIC15.87■□□□□ 0.13
Trim33Q99PP7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.87■□□□□ 0.13
Trim33Q99PP7 Gm44430-201ENSMUST00000203376 995 ntBASIC15.87■□□□□ 0.13
Trim33Q99PP7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim33Q99PP7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim33Q99PP7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim33Q99PP7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms