Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Gm12490-201ENSMUST00000120255 560 ntBASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cdh23Q99PF4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh23Q99PF4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cdh23Q99PF4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.21■□□□□ 0.18
Cdh23Q99PF4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.21■□□□□ 0.18
Cdh23Q99PF4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh23Q99PF4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh23Q99PF4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Gm38294-201ENSMUST00000192831 381 ntBASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh23Q99PF4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Gm13453-201ENSMUST00000118708 357 ntBASIC16.19■□□□□ 0.18
Cdh23Q99PF4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cdh23Q99PF4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm14719-201ENSMUST00000121891 340 ntBASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Mir7684-201ENSMUST00000183858 60 ntBASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh23Q99PF4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms