Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Usp16Q99LG0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp16Q99LG0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm8097-201ENSMUST00000117903 829 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm8825-201ENSMUST00000182565 998 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm4518-201ENSMUST00000182638 718 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm8655-201ENSMUST00000221159 852 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Mzt1-203ENSMUST00000227948 952 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.4■□□□□ 0.86
Usp16Q99LG0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp16Q99LG0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Usp16Q99LG0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp16Q99LG0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp16Q99LG0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.39■□□□□ 0.85
Usp16Q99LG0 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.39■□□□□ 0.85
Usp16Q99LG0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms