Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Gm5177-201ENSMUST00000183092 997 ntBASIC19.71■□□□□ 0.75
RtcbQ99LF4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Gm20949-201ENSMUST00000206478 952 ntBASIC19.71■□□□□ 0.75
RtcbQ99LF4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Gm19164-201ENSMUST00000210667 640 ntBASIC19.7■□□□□ 0.74
RtcbQ99LF4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.7■□□□□ 0.74
RtcbQ99LF4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RtcbQ99LF4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
RtcbQ99LF4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.69■□□□□ 0.74
RtcbQ99LF4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RtcbQ99LF4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.68■□□□□ 0.74
RtcbQ99LF4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.68■□□□□ 0.74
RtcbQ99LF4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.68■□□□□ 0.74
RtcbQ99LF4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RtcbQ99LF4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.67■□□□□ 0.74
RtcbQ99LF4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.67■□□□□ 0.74
RtcbQ99LF4 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.67■□□□□ 0.74
RtcbQ99LF4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RtcbQ99LF4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms