Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Gm9013-201ENSMUST00000132939 882 ntBASIC16.92■□□□□ 0.3
Usp11Q99K46 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.92■□□□□ 0.3
Usp11Q99K46 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.92■□□□□ 0.3
Usp11Q99K46 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp11Q99K46 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 AA414768-201ENSMUST00000121924 1257 ntBASIC16.91■□□□□ 0.3
Usp11Q99K46 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp11Q99K46 Gm37722-201ENSMUST00000193757 208 ntBASIC16.91■□□□□ 0.3
Usp11Q99K46 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp11Q99K46 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.91■□□□□ 0.3
Usp11Q99K46 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.91■□□□□ 0.3
Usp11Q99K46 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp11Q99K46 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Usp11Q99K46 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp11Q99K46 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Usp11Q99K46 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm11336-201ENSMUST00000118168 334 ntBASIC16.9■□□□□ 0.3
Usp11Q99K46 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gm5587-201ENSMUST00000206270 674 ntBASIC16.9■□□□□ 0.3
Usp11Q99K46 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp11Q99K46 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Usp11Q99K46 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Usp11Q99K46 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp11Q99K46 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp11Q99K46 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Usp11Q99K46 Gm25016-201ENSMUST00000158399 131 ntBASIC16.89■□□□□ 0.29
Usp11Q99K46 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp11Q99K46 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp11Q99K46 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp11Q99K46 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.88■□□□□ 0.29
Usp11Q99K46 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp11Q99K46 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms