Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha3Q91Y16 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Rprl3-201ENSMUST00000157400 290 ntBASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha3Q91Y16 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Gm13312-201ENSMUST00000119631 718 ntBASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdha3Q91Y16 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha3Q91Y16 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdha3Q91Y16 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdha3Q91Y16 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms