Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm27867-201ENSMUST00000184778 125 ntBASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha9Q91Y11 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdha9Q91Y11 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha9Q91Y11 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Gm9172-201ENSMUST00000212092 954 ntBASIC17■□□□□ 0.31
Pcdha9Q91Y11 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha9Q91Y11 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm6257-201ENSMUST00000163864 910 ntBASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm25745-201ENSMUST00000174945 133 ntBASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm10819-201ENSMUST00000099988 561 ntBASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdha9Q91Y11 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms