Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb1Q91Y08 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb1Q91Y08 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb1Q91Y08 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Gm13312-201ENSMUST00000119631 718 ntBASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb1Q91Y08 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb1Q91Y08 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb1Q91Y08 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gm27742-201ENSMUST00000184667 60 ntBASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms