Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb22Q91XZ8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb22Q91XZ8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Gm12644-201ENSMUST00000119935 606 ntBASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb22Q91XZ8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb22Q91XZ8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb22Q91XZ8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Pcdhb22Q91XZ8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb22Q91XZ8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb22Q91XZ8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms