Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb5Q91XZ5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Gm27397-201ENSMUST00000184997 107 ntBASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb5Q91XZ5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb5Q91XZ5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb5Q91XZ5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm23935-201ENSMUST00000102303 57 ntBASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm24270-201ENSMUST00000102326 57 ntBASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm24245-201ENSMUST00000157318 57 ntBASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm45167-201ENSMUST00000208007 322 ntBASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb5Q91XZ5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms