Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.77■□□□□ 0.28
Snrnp25Q8VIK1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snrnp25Q8VIK1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snrnp25Q8VIK1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snrnp25Q8VIK1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Gm24589-201ENSMUST00000116692 94 ntBASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms