Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.38□□□□□ -0.11
Ccdc58Q8R3Q6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Gm12441-201ENSMUST00000121806 588 ntBASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc58Q8R3Q6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms