Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slf1Q8R3P9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Gm27011-201ENSMUST00000182352 972 ntBASIC16.21■□□□□ 0.19
Slf1Q8R3P9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Slf1Q8R3P9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slf1Q8R3P9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.21■□□□□ 0.18
Slf1Q8R3P9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Slf1Q8R3P9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.21■□□□□ 0.18
Slf1Q8R3P9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slf1Q8R3P9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.19■□□□□ 0.18
Slf1Q8R3P9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.19■□□□□ 0.18
Slf1Q8R3P9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slf1Q8R3P9 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms