Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cnot3Q8K0V4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.06■□□□□ 0
Cnot3Q8K0V4 Gm7791-201ENSMUST00000219066 539 ntBASIC15.06■□□□□ 0
Cnot3Q8K0V4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cnot3Q8K0V4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.05■□□□□ 0
Cnot3Q8K0V4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.05■□□□□ -0
Cnot3Q8K0V4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cnot3Q8K0V4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 App-207ENSMUST00000227737 2827 ntBASIC15.04■□□□□ -0
Cnot3Q8K0V4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Gm13186-201ENSMUST00000118031 316 ntBASIC15.04■□□□□ -0
Cnot3Q8K0V4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.04■□□□□ -0
Cnot3Q8K0V4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cnot3Q8K0V4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cnot3Q8K0V4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms