Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Mir770-201ENSMUST00000103252 94 ntBASIC16.17■□□□□ 0.18
Clip4Q8CI96 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gm18115-201ENSMUST00000221209 621 ntBASIC16.17■□□□□ 0.18
Clip4Q8CI96 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clip4Q8CI96 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Gm6623-201ENSMUST00000173570 544 ntBASIC16.16■□□□□ 0.18
Clip4Q8CI96 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.16■□□□□ 0.18
Clip4Q8CI96 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Prob1-201ENSMUST00000097619 3021 ntBASIC16.16■□□□□ 0.18
Clip4Q8CI96 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clip4Q8CI96 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gm14859-201ENSMUST00000117752 357 ntBASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gm11950-201ENSMUST00000121615 838 ntBASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clip4Q8CI96 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Clip4Q8CI96 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms