Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gm11780-201ENSMUST00000136880 516 ntBASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gm6089-201ENSMUST00000197666 938 ntBASIC19.69■□□□□ 0.74
Smc4Q8CG47 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc4Q8CG47 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smc4Q8CG47 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.67■□□□□ 0.74
Smc4Q8CG47 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Smc4Q8CG47 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Gm18622-201ENSMUST00000219361 595 ntBASIC19.67■□□□□ 0.74
Smc4Q8CG47 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc4Q8CG47 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc4Q8CG47 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc4Q8CG47 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Gm15173-201ENSMUST00000122049 433 ntBASIC19.65■□□□□ 0.74
Smc4Q8CG47 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.65■□□□□ 0.74
Smc4Q8CG47 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.65■□□□□ 0.74
Smc4Q8CG47 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.65■□□□□ 0.74
Smc4Q8CG47 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc4Q8CG47 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc4Q8CG47 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.64■□□□□ 0.73
Smc4Q8CG47 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms