Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.81■□□□□ 0.76
Smc5Q8CG46 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.81■□□□□ 0.76
Smc5Q8CG46 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Gm44430-201ENSMUST00000203376 995 ntBASIC19.81■□□□□ 0.76
Smc5Q8CG46 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.81■□□□□ 0.76
Smc5Q8CG46 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc5Q8CG46 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.8■□□□□ 0.76
Smc5Q8CG46 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.8■□□□□ 0.76
Smc5Q8CG46 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc5Q8CG46 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.79■□□□□ 0.76
Smc5Q8CG46 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc5Q8CG46 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.78■□□□□ 0.76
Smc5Q8CG46 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm43799-201ENSMUST00000201845 579 ntBASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm18959-201ENSMUST00000208954 655 ntBASIC19.78■□□□□ 0.76
Smc5Q8CG46 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm21559-201ENSMUST00000220638 855 ntBASIC19.78■□□□□ 0.76
Smc5Q8CG46 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Gm8587-201ENSMUST00000076538 843 ntBASIC19.78■□□□□ 0.76
Smc5Q8CG46 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc5Q8CG46 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc5Q8CG46 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms