Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.67■□□□□ 0.58
Alx1Q8C8B0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx1Q8C8B0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm13884-201ENSMUST00000118103 829 ntBASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Gm6376-201ENSMUST00000209407 580 ntBASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Alx1Q8C8B0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Alx1Q8C8B0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.64■□□□□ 0.58
Alx1Q8C8B0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Gm28659-201ENSMUST00000188013 759 ntBASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.64■□□□□ 0.57
Alx1Q8C8B0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx1Q8C8B0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Gm13418-201ENSMUST00000119097 944 ntBASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.63■□□□□ 0.57
Alx1Q8C8B0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx1Q8C8B0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms