Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ska3Q8C263 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ska3Q8C263 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Gm17807-201ENSMUST00000186869 298 ntBASIC15.06■□□□□ 0
Ska3Q8C263 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.06■□□□□ 0
Ska3Q8C263 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.06■□□□□ 0
Ska3Q8C263 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.06■□□□□ 0
Ska3Q8C263 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ska3Q8C263 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.06■□□□□ 0
Ska3Q8C263 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ska3Q8C263 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ska3Q8C263 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ska3Q8C263 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ska3Q8C263 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ska3Q8C263 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.05■□□□□ -0
Ska3Q8C263 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.05■□□□□ -0
Ska3Q8C263 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.05■□□□□ -0
Ska3Q8C263 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ska3Q8C263 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.04■□□□□ -0
Ska3Q8C263 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ska3Q8C263 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
Ska3Q8C263 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ska3Q8C263 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.04■□□□□ -0
Ska3Q8C263 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ska3Q8C263 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.03■□□□□ -0
Ska3Q8C263 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.03■□□□□ -0
Ska3Q8C263 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ska3Q8C263 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.03■□□□□ -0
Ska3Q8C263 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.03■□□□□ -0
Ska3Q8C263 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.03■□□□□ -0
Ska3Q8C263 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.03■□□□□ -0
Ska3Q8C263 Ank2-226ENSMUST00000189368 339 ntBASIC15.03■□□□□ -0
Ska3Q8C263 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.03■□□□□ -0
Ska3Q8C263 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ska3Q8C263 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Ska3Q8C263 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska3Q8C263 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms