Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC22.55■■□□□ 1.2
Usp47Q8BY87 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 AC127302.2-201ENSMUST00000215212 268 ntBASIC22.54■■□□□ 1.2
Usp47Q8BY87 AV026068-213ENSMUST00000223675 1171 ntBASIC22.54■■□□□ 1.2
Usp47Q8BY87 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp47Q8BY87 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp47Q8BY87 Gm7222-201ENSMUST00000117512 906 ntBASIC22.52■■□□□ 1.2
Usp47Q8BY87 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.52■■□□□ 1.2
Usp47Q8BY87 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Usp47Q8BY87 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Usp47Q8BY87 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Usp47Q8BY87 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Usp47Q8BY87 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Ntrk2-205ENSMUST00000224402 2284 ntBASIC22.51■■□□□ 1.19
Usp47Q8BY87 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp47Q8BY87 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC22.5■■□□□ 1.19
Usp47Q8BY87 AC154527.4-201ENSMUST00000224364 1667 ntBASIC22.5■■□□□ 1.19
Usp47Q8BY87 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC22.5■■□□□ 1.19
Usp47Q8BY87 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp47Q8BY87 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC22.49■■□□□ 1.19
Usp47Q8BY87 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp47Q8BY87 Gm13036-201ENSMUST00000117799 748 ntBASIC22.49■■□□□ 1.19
Usp47Q8BY87 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms