Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.21■□□□□ 0.19
Usp43Q8BUM9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp43Q8BUM9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp43Q8BUM9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp43Q8BUM9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp43Q8BUM9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Rprl3-201ENSMUST00000157400 290 ntBASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp43Q8BUM9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp43Q8BUM9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms