Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Gm5682-201ENSMUST00000173402 505 ntBASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scfd1Q8BRF7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scfd1Q8BRF7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Gm15358-201ENSMUST00000119249 520 ntBASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scfd1Q8BRF7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scfd1Q8BRF7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms