Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Gm11336-201ENSMUST00000118168 334 ntBASIC17.19■□□□□ 0.34
Nop53Q8BK35 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.18■□□□□ 0.34
Nop53Q8BK35 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.18■□□□□ 0.34
Nop53Q8BK35 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.18■□□□□ 0.34
Nop53Q8BK35 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nop53Q8BK35 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.17■□□□□ 0.34
Nop53Q8BK35 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.17■□□□□ 0.34
Nop53Q8BK35 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nop53Q8BK35 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.16■□□□□ 0.34
Nop53Q8BK35 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
Nop53Q8BK35 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms