Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc116Q80X53 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Gm6623-201ENSMUST00000173570 544 ntBASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc116Q80X53 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc116Q80X53 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccdc116Q80X53 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms