Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.71■□□□□ 0.26
Srrm3Q80WV7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm3Q80WV7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm3Q80WV7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm3Q80WV7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Gm7153-201ENSMUST00000117092 455 ntBASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.67■□□□□ 0.26
Srrm3Q80WV7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm3Q80WV7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms