Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Gm8097-201ENSMUST00000117903 829 ntBASIC14.75□□□□□ -0.05
Pif1Q80SX8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Gm8655-201ENSMUST00000221159 852 ntBASIC14.75□□□□□ -0.05
Pif1Q80SX8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.74□□□□□ -0.05
Pif1Q80SX8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm12260-201ENSMUST00000122447 411 ntBASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm6089-201ENSMUST00000197666 938 ntBASIC14.74□□□□□ -0.05
Pif1Q80SX8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 AV026068-213ENSMUST00000223675 1171 ntBASIC14.74□□□□□ -0.05
Pif1Q80SX8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pif1Q80SX8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.73□□□□□ -0.05
Pif1Q80SX8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Gm6550-201ENSMUST00000187574 993 ntBASIC14.73□□□□□ -0.05
Pif1Q80SX8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.73□□□□□ -0.05
Pif1Q80SX8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pif1Q80SX8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.72□□□□□ -0.05
Pif1Q80SX8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.72□□□□□ -0.05
Pif1Q80SX8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms