Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Sned1Q70E20 Mir7684-201ENSMUST00000183858 60 ntBASIC19.23■□□□□ 0.67
Sned1Q70E20 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Sned1Q70E20 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sned1Q70E20 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
Sned1Q70E20 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sned1Q70E20 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Sned1Q70E20 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.22■□□□□ 0.67
Sned1Q70E20 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Mir8102-201ENSMUST00000184148 139 ntBASIC19.22■□□□□ 0.67
Sned1Q70E20 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
Sned1Q70E20 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sned1Q70E20 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sned1Q70E20 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sned1Q70E20 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sned1Q70E20 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sned1Q70E20 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Sned1Q70E20 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.21■□□□□ 0.67
Sned1Q70E20 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sned1Q70E20 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Sned1Q70E20 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.2■□□□□ 0.66
Sned1Q70E20 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sned1Q70E20 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Sned1Q70E20 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.2■□□□□ 0.66
Sned1Q70E20 Gm7653-201ENSMUST00000214567 508 ntBASIC19.2■□□□□ 0.66
Sned1Q70E20 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Grk6-207ENSMUST00000225925 2769 ntBASIC19.2■□□□□ 0.66
Sned1Q70E20 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sned1Q70E20 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sned1Q70E20 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Gm6415-201ENSMUST00000118488 348 ntBASIC19.19■□□□□ 0.66
Sned1Q70E20 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.19■□□□□ 0.66
Sned1Q70E20 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sned1Q70E20 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Gm6973-201ENSMUST00000117080 721 ntBASIC19.18■□□□□ 0.66
Sned1Q70E20 Gm14127-201ENSMUST00000117906 678 ntBASIC19.18■□□□□ 0.66
Sned1Q70E20 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.18■□□□□ 0.66
Sned1Q70E20 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.18■□□□□ 0.66
Sned1Q70E20 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.18■□□□□ 0.66
Sned1Q70E20 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sned1Q70E20 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sned1Q70E20 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms