Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsm8Q6ZWM4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Gm6257-201ENSMUST00000163864 910 ntBASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm8Q6ZWM4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsm8Q6ZWM4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Lsm8Q6ZWM4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm8Q6ZWM4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm8Q6ZWM4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms