Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Psmb5-202ENSMUST00000227257 622 ntBASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx58Q6Q899 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx58Q6Q899 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Gm27628-201ENSMUST00000184911 107 ntBASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx58Q6Q899 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms