Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Gm29707-201ENSMUST00000196325 491 ntBASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scaf4Q6PFF0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gm715-201ENSMUST00000117865 831 ntBASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gm21814-202ENSMUST00000203277 873 ntBASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scaf4Q6PFF0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Gm11336-201ENSMUST00000118168 334 ntBASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scaf4Q6PFF0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scaf4Q6PFF0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms