Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85bQ6PDY0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Gm23547-201ENSMUST00000158210 271 ntBASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc85bQ6PDY0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Gm14127-201ENSMUST00000117906 678 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Gm27646-201ENSMUST00000183989 110 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc85bQ6PDY0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Gm12428-201ENSMUST00000119844 727 ntBASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Gm11764-201ENSMUST00000120221 623 ntBASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Gm25948-201ENSMUST00000175334 112 ntBASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85bQ6PDY0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Gm13365-201ENSMUST00000121188 973 ntBASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85bQ6PDY0 Mir6977-201ENSMUST00000184960 64 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms