Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd3Q6P9Z1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Gm30025-201ENSMUST00000218555 728 ntBASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd3Q6P9Z1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd3Q6P9Z1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd3Q6P9Z1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Gm36967-201ENSMUST00000193814 266 ntBASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Gm7213-201ENSMUST00000215977 950 ntBASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms