Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gm12260-201ENSMUST00000122447 411 ntBASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smchd1Q6P5D8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smchd1Q6P5D8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smchd1Q6P5D8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.5■□□□□ 0.39
Smchd1Q6P5D8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Gm9727-201ENSMUST00000161387 555 ntBASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Gm10175-201ENSMUST00000086013 645 ntBASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smchd1Q6P5D8 Gm11594-201ENSMUST00000122313 162 ntBASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms