Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga7Q6DD96 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Gm15565-201ENSMUST00000118890 427 ntBASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga7Q6DD96 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.54■□□□□ 0.08
Pcdhga7Q6DD96 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Prob1-201ENSMUST00000097619 3021 ntBASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga7Q6DD96 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga7Q6DD96 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms