Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm43179-201ENSMUST00000198797 275 ntBASIC13.17□□□□□ -0.3
Col7a1Q63870 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm18737-201ENSMUST00000173594 937 ntBASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col7a1Q63870 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col7a1Q63870 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Gm18246-201ENSMUST00000221023 728 ntBASIC13.16□□□□□ -0.3
Col7a1Q63870 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.16□□□□□ -0.3
Col7a1Q63870 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col7a1Q63870 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col7a1Q63870 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.15□□□□□ -0.3
Col7a1Q63870 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.15□□□□□ -0.3
Col7a1Q63870 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Gm3786-201ENSMUST00000202659 378 ntBASIC13.15□□□□□ -0.3
Col7a1Q63870 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col7a1Q63870 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col7a1Q63870 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col7a1Q63870 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col7a1Q63870 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col7a1Q63870 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm26461-201ENSMUST00000175064 290 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm9824-201ENSMUST00000178707 561 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col7a1Q63870 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.14□□□□□ -0.31
Col7a1Q63870 Gm8410-201ENSMUST00000117225 605 ntBASIC13.14□□□□□ -0.31
Col7a1Q63870 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms