Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.06■□□□□ 0.32
Six2Q62232 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.06■□□□□ 0.32
Six2Q62232 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Six2Q62232 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.06■□□□□ 0.32
Six2Q62232 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Six2Q62232 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Six2Q62232 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six2Q62232 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Six2Q62232 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Six2Q62232 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Six2Q62232 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.05■□□□□ 0.32
Six2Q62232 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Six2Q62232 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six2Q62232 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six2Q62232 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six2Q62232 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Six2Q62232 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.04■□□□□ 0.32
Six2Q62232 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.04■□□□□ 0.32
Six2Q62232 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.04■□□□□ 0.32
Six2Q62232 Gm27742-201ENSMUST00000184667 60 ntBASIC17.04■□□□□ 0.32
Six2Q62232 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Six2Q62232 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six2Q62232 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Six2Q62232 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.04■□□□□ 0.32
Six2Q62232 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Six2Q62232 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.03■□□□□ 0.32
Six2Q62232 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.03■□□□□ 0.32
Six2Q62232 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.03■□□□□ 0.32
Six2Q62232 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six2Q62232 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six2Q62232 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.02■□□□□ 0.32
Six2Q62232 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.02■□□□□ 0.32
Six2Q62232 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six2Q62232 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms