Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.53■■□□□ 1.04
Gli3Q61602 Gm10154-201ENSMUST00000084445 354 ntBASIC21.53■■□□□ 1.04
Gli3Q61602 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.53■■□□□ 1.04
Gli3Q61602 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gli3Q61602 Gm13517-201ENSMUST00000120782 1495 ntBASIC21.52■■□□□ 1.04
Gli3Q61602 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.52■■□□□ 1.04
Gli3Q61602 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Gli3Q61602 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Gli3Q61602 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.52■■□□□ 1.04
Gli3Q61602 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Gm13015-201ENSMUST00000118674 204 ntBASIC21.52■■□□□ 1.04
Gli3Q61602 Gm13829-201ENSMUST00000119600 138 ntBASIC21.52■■□□□ 1.04
Gli3Q61602 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Gm28631-201ENSMUST00000190740 334 ntBASIC21.52■■□□□ 1.04
Gli3Q61602 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gli3Q61602 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Gli3Q61602 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Gli3Q61602 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC21.51■■□□□ 1.03
Gli3Q61602 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.51■■□□□ 1.03
Gli3Q61602 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gli3Q61602 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Gli3Q61602 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Gli3Q61602 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Gli3Q61602 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Gli3Q61602 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Gli3Q61602 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Gm6218-201ENSMUST00000219812 628 ntBASIC21.5■■□□□ 1.03
Gli3Q61602 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gli3Q61602 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.5■■□□□ 1.03
Gli3Q61602 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Gli3Q61602 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Gm27838-201ENSMUST00000184829 128 ntBASIC21.49■■□□□ 1.03
Gli3Q61602 Ighv5-13-201ENSMUST00000193550 290 ntBASIC21.49■■□□□ 1.03
Gli3Q61602 AY702102-202ENSMUST00000194651 1173 ntBASIC21.49■■□□□ 1.03
Gli3Q61602 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.49■■□□□ 1.03
Gli3Q61602 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gli3Q61602 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Gli3Q61602 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC21.48■■□□□ 1.03
Gli3Q61602 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC21.48■■□□□ 1.03
Gli3Q61602 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Gli3Q61602 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.48■■□□□ 1.03
Gli3Q61602 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Gli3Q61602 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC21.48■■□□□ 1.03
Gli3Q61602 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gli3Q61602 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gli3Q61602 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Gli3Q61602 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gli3Q61602 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Gm6266-201ENSMUST00000203844 806 ntBASIC21.47■■□□□ 1.03
Gli3Q61602 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.47■■□□□ 1.03
Gli3Q61602 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gli3Q61602 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gli3Q61602 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gli3Q61602 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms