Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ecm1Q61508 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.67■□□□□ 0.42
Ecm1Q61508 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.67■□□□□ 0.42
Ecm1Q61508 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.67■□□□□ 0.42
Ecm1Q61508 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ecm1Q61508 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ecm1Q61508 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ecm1Q61508 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm11025-201ENSMUST00000140773 466 ntBASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.66■□□□□ 0.42
Ecm1Q61508 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ecm1Q61508 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Ecm1Q61508 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ecm1Q61508 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.65■□□□□ 0.42
Ecm1Q61508 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.65■□□□□ 0.42
Ecm1Q61508 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.65■□□□□ 0.42
Ecm1Q61508 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ecm1Q61508 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.65■□□□□ 0.42
Ecm1Q61508 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.64■□□□□ 0.42
Ecm1Q61508 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Gm14701-201ENSMUST00000117156 348 ntBASIC17.64■□□□□ 0.41
Ecm1Q61508 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ecm1Q61508 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ecm1Q61508 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.63■□□□□ 0.41
Ecm1Q61508 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.63■□□□□ 0.41
Ecm1Q61508 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.63■□□□□ 0.41
Ecm1Q61508 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ecm1Q61508 Gm8396-201ENSMUST00000057361 823 ntBASIC17.63■□□□□ 0.41
Ecm1Q61508 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ecm1Q61508 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms