Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ptch1Q61115 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
Ptch1Q61115 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC22.95■■□□□ 1.26
Ptch1Q61115 Wnt10b-206ENSMUST00000228546 2709 ntBASIC22.95■■□□□ 1.26
Ptch1Q61115 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch1Q61115 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC22.94■■□□□ 1.26
Ptch1Q61115 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
Ptch1Q61115 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ptch1Q61115 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC22.94■■□□□ 1.26
Ptch1Q61115 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch1Q61115 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC22.93■■□□□ 1.26
Ptch1Q61115 Gm11453-201ENSMUST00000117318 1007 ntBASIC22.93■■□□□ 1.26
Ptch1Q61115 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC22.93■■□□□ 1.26
Ptch1Q61115 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Ptch1Q61115 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch1Q61115 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ptch1Q61115 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC22.92■■□□□ 1.26
Ptch1Q61115 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC22.91■■□□□ 1.26
Ptch1Q61115 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ptch1Q61115 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch1Q61115 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.9■■□□□ 1.26
Ptch1Q61115 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Ptch1Q61115 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch1Q61115 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch1Q61115 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.9■■□□□ 1.26
Ptch1Q61115 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch1Q61115 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ptch1Q61115 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC22.9■■□□□ 1.26
Ptch1Q61115 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Ptch1Q61115 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ptch1Q61115 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ptch1Q61115 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ptch1Q61115 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ptch1Q61115 Gm12017-201ENSMUST00000122453 1003 ntBASIC22.89■■□□□ 1.25
Ptch1Q61115 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ptch1Q61115 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms