Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm18622-201ENSMUST00000219361 595 ntBASIC16.36■□□□□ 0.21
Slc6a4Q60857 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.36■□□□□ 0.21
Slc6a4Q60857 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Gm15173-201ENSMUST00000122049 433 ntBASIC16.35■□□□□ 0.21
Slc6a4Q60857 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.35■□□□□ 0.21
Slc6a4Q60857 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Slc6a4Q60857 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.34■□□□□ 0.21
Slc6a4Q60857 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm7230-201ENSMUST00000173026 815 ntBASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm6089-201ENSMUST00000197666 938 ntBASIC16.34■□□□□ 0.21
Slc6a4Q60857 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a4Q60857 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Slc6a4Q60857 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.21
Slc6a4Q60857 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a4Q60857 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a4Q60857 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a4Q60857 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Gm12350-201ENSMUST00000121208 462 ntBASIC16.33■□□□□ 0.2
Slc6a4Q60857 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a4Q60857 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a4Q60857 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms