Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1h4Q60641 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1h4Q60641 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1h4Q60641 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Gm18421-201ENSMUST00000204122 625 ntBASIC15.26■□□□□ 0.03
Nr1h4Q60641 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.26■□□□□ 0.03
Nr1h4Q60641 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1h4Q60641 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Gm8520-201ENSMUST00000186517 868 ntBASIC15.25■□□□□ 0.03
Nr1h4Q60641 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.25■□□□□ 0.03
Nr1h4Q60641 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1h4Q60641 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gm13474-201ENSMUST00000122466 815 ntBASIC15.24■□□□□ 0.03
Nr1h4Q60641 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gm29707-201ENSMUST00000196325 491 ntBASIC15.24■□□□□ 0.03
Nr1h4Q60641 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.24■□□□□ 0.03
Nr1h4Q60641 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms