Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Gm7367-201ENSMUST00000057611 492 ntBASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a4Q5XF90 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atp13a4Q5XF90 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gm27357-201ENSMUST00000183754 135 ntBASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Ank2-226ENSMUST00000189368 339 ntBASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Gm21362-201ENSMUST00000194272 928 ntBASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp13a4Q5XF90 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp13a4Q5XF90 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atp13a4Q5XF90 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms