Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scarf1Q5ND28 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Gm4459-201ENSMUST00000118750 468 ntBASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Gm9172-201ENSMUST00000212092 954 ntBASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarf1Q5ND28 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scarf1Q5ND28 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarf1Q5ND28 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.48■□□□□ 0.39
Scarf1Q5ND28 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scarf1Q5ND28 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarf1Q5ND28 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarf1Q5ND28 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarf1Q5ND28 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms