Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Mir5122-201ENSMUST00000175004 89 ntBASIC16.74■□□□□ 0.27
Vps41Q5KU39 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps41Q5KU39 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.74■□□□□ 0.27
Vps41Q5KU39 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm11539-201ENSMUST00000119837 557 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm8520-201ENSMUST00000186517 868 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm21814-202ENSMUST00000203277 873 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm7370-201ENSMUST00000219471 767 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.73■□□□□ 0.27
Vps41Q5KU39 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps41Q5KU39 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Gm18115-201ENSMUST00000221209 621 ntBASIC16.72■□□□□ 0.27
Vps41Q5KU39 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps41Q5KU39 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Gm44450-201ENSMUST00000199528 114 ntBASIC16.71■□□□□ 0.27
Vps41Q5KU39 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.71■□□□□ 0.27
Vps41Q5KU39 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps41Q5KU39 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.71■□□□□ 0.26
Vps41Q5KU39 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.7■□□□□ 0.26
Vps41Q5KU39 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms