Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Gm27430-201ENSMUST00000184585 107 ntBASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Gm44333-201ENSMUST00000197168 107 ntBASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13aQ5H8C4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13aQ5H8C4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Mir6404-201ENSMUST00000183699 94 ntBASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Gm9899-201ENSMUST00000065519 555 ntBASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13aQ5H8C4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Gm14719-201ENSMUST00000121891 340 ntBASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13aQ5H8C4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Gm7730-201ENSMUST00000212486 454 ntBASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms