Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm22175-201ENSMUST00000175007 78 ntBASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank3Q4ACU6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm7774-201ENSMUST00000200064 533 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm38294-201ENSMUST00000192831 381 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Gm10253-201ENSMUST00000194270 940 ntBASIC19.79■□□□□ 0.76
Shank3Q4ACU6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank3Q4ACU6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Gm11424-201ENSMUST00000121929 829 ntBASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank3Q4ACU6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.77■□□□□ 0.76
Shank3Q4ACU6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Shank3Q4ACU6 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.77■□□□□ 0.75
Shank3Q4ACU6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shank3Q4ACU6 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.76■□□□□ 0.75
Shank3Q4ACU6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.76■□□□□ 0.75
Shank3Q4ACU6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms