Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap2Q3V1H1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Gm25745-201ENSMUST00000174945 133 ntBASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.35■□□□□ 0.53
Ckap2Q3V1H1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap2Q3V1H1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap2Q3V1H1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap2Q3V1H1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ckap2Q3V1H1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm12497-201ENSMUST00000138778 237 ntBASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms